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Explain the binding constant (Kb) and fractional saturation (Y bar) equations.
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Binding Constant ()
The binding constant () describes the equilibrium between an enzyme (E) and a substrate (S) forming an enzyme-substrate complex (ES). It's a measure of the affinity of the enzyme for its substrate.
The general definition of an equilibrium constant for a reaction is the ratio of the concentration of the product to the concentrations of the reactants at equilibrium.
Here:
- is the concentration of the enzyme-substrate complex.
- is the concentration of free enzyme.
- is the concentration of free substrate.
To make $[ES]$ the subject of the formula, we rearrange Equation 2
This equation shows that the concentration of the enzyme-substrate complex is directly proportional to the binding constant, the free enzyme concentration, and the free substrate concentration.
Fractional Saturation ()
Fractional saturation () represents the fraction of the total enzyme that is bound to the substrate at any given time. It indicates how much of the enzyme's active sites are occupied.
The definition of fractional saturation is the concentration of the enzyme-substrate complex divided by the total enzyme concentration.
In terms of enzyme kinetics:
Here, (or ) represents the total enzyme concentration.
The total enzyme concentration () is the sum of all forms of the enzyme present in the system.
In the simple binding reaction , the total enzyme is either free enzyme () or enzyme bound in the complex ().
Substitute Equation 5 into Equation 4 to express fractional saturation in terms of free enzyme and enzyme-substrate complex
This equation shows the fraction of enzyme active sites that are occupied by substrate.
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